Recommendations for animal DNA forensic and identity testing

Budowle,B.; Garofano,P.; Hellman,A.; Ketchum,M.; Kanthaswamy,S.; Parson,W.; van Haeringen,W.; Fain,S.; Broad,T. Genetic analysis in animals has been used for many applications, such as kinship analysis, for determining the sire of an offspring when a female has been exposed to multiple males, determining parentage when an animal switches offspring with another dam, extended lineage reconstruction, estimating inbreeding, identification in breed registries, and speciation. It now also is being used increasingly to characterize animal materials in forensic cases. [Read More]

Sequence analysis of the canine mitochondrial DNA control region from shed hair samples in criminal investigations

Berger,C.; Berger,B.; Parson,W. In recent years, evidence from domestic dogs has increasingly been analyzed by forensic DNA testing. Especially, canine hairs have proved most suitable and practical due to the high rate of hair transfer occurring between dogs and humans. Starting with the description of a contamination-free sample handling procedure, we give a detailed workflow for sequencing hypervariable segments (HVS) of the mtDNA control region from canine evidence. After the hair material is lysed and the DNA extracted by Phenol/Chloroform, the amplification and sequencing strategy comprises the HVS I and II of the canine control region and is optimized for DNA of medium-to-low quality and quantity. [Read More]

Species identification by means of the cytochrome b gene

Parson,W.; Pegoraro,K.; Niederstätter,H.; Föger,M.; Steinlechner,M. Species identification was carried out by nucleotide sequence analysis of the cytochrome b (cytb) gene. The aim of the study was to identify biological specimens from diverse vertebrate animals by extracting and amplifying DNA from 44 different animal species covering the 5 major vertebrate groups (i.e. mammals, birds, reptiles, amphibians and fishes). The sequences derived were used to identify the biological origin of the samples by aligning to cytb gene sequence entries in nucleotide databases using the program BLAST. [Read More]

Validation of two canine STR multiplex-assays following the ISFG recommendations for non-human DNA analysis

Berger,B.;Berger,C.;Hecht,W.;Hellmann,A.;Rohleder,U.;Schleenbecker,U.;Parson,W.; To gain general acceptance forensic DNA testing in animals needs to improve standardization of analysis methods and data interpretation. Recently, the International Society of Forensic Genetics (ISFG) took particular care of this topic by publishing recommendations for forensic non-human DNA analysis following the successful example of human DNA analysis in order to provide a basis for harmonization of the still existing inter-laboratory variability. By following these recommendations we demonstrate the performance of two short tandem repeat (STR) multiplexes for forensic identity testing of canine biological material. [Read More]